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Nanomembrane Research Group
  • NRG

    Variation of TEER on the active area and membrane geometry

    ByTejas Khire April 11, 2017April 11, 2017

    [Background read – https://trace-bmps.org/blog/theory/2015/01/28/why-teer-values-are-multiplied-by-membrane-area-dc-version] I am putting the excerpt of this old post from Jim in this post.   Tom helped me in gathering this data. In order to prove my point that electrical resistance is very sensitive to the membrane geometry, I decided to perform some proof-of-concept experiments with regular transwells. I used 3…

    Read More Variation of TEER on the active area and membrane geometryContinue

  • NRG

    Beckham Lab Exosome Ultracentrifugation Protocol

    ByKilean April 11, 2017

    When Aslan and I went to the Beckham lab last week, they gave us a copy of their ultracentrifugation protocol for isolating exosomes. I attached it here so that we can have it as a reference. The major thing to note is that they typically use 13-15 mL volumes of media to begin their centrifugation…

    Read More Beckham Lab Exosome Ultracentrifugation ProtocolContinue

  • NRG

    ADSC Mechanotransduction: YAP/TAZ, adhesion complexes, and the cytoskeleton

    ByStephanie Casillo April 11, 2017

    YAP/TAZ YAP/TAZ intracellular localization, and subsequent transcriptional activity, has indicated its role in pathways of mechanotransduction. Investigation of the effects of substrate stiffness on MSC growth and differentiation point to YAP/TAZ as an indicator of how cells are perceiving their mechanical microenvironment and a regulator of the cells’ response to this environment. MSCs cultured on stiff…

    Read More ADSC Mechanotransduction: YAP/TAZ, adhesion complexes, and the cytoskeletonContinue

  • NRG

    Summary for Visiting the Urology lab

    ByAslan April 10, 2017

    Hello Everyone, Here is an update of our meeting in Strong Hospital: So They are working in an urology lab, We met Sam who is a technician in Dr. Carla Beckham’s lab, he is responsible for cell culture part of the project. The cell line that they are working with is T24 with 80 -95% confluency….

    Read More Summary for Visiting the Urology labContinue

  • NRG

    SEM 4 slot 75 nm NPN

    ByDean Johnson April 10, 2017April 12, 2017

    SEM of lot # 1208, four-slot 75-nm NPN at 1014x, 1972x, 4101, and 5351x mag. The next image is with a tilted sample. (from the same lot of chips #1208 4-slot 5.4 mm chips) The next five show the edge from the top side. I think the second image is the best of the bunch….

    Read More SEM 4 slot 75 nm NPNContinue

  • NRG

    Manual Reconstruction of Electron Tomograms

    ByGreg Madejski April 4, 2017

    Using the techniques described in my previous post: TEM Tomography of NPN and npMgF2, we have recreated some tomograms that have contour (position) and height (depth) information contained in them. Our goal now is to express that height information in the form of a surface, or volume.         Segmentation Having some evidence that…

    Read More Manual Reconstruction of Electron TomogramsContinue

  • NRG

    TEM images of dried gold solutions

    ByKarl Smith March 28, 2017March 28, 2017

    For the modeling paper, I had to precisely quantify the distribution of gold nanoparticles in the BBI solutions. To do this, I dried the stock solutions of particles on TEM grids (I don’t know what chips I used, but I seem to recall – and take this with a grain of salt – that the grids…

    Read More TEM images of dried gold solutionsContinue

  • NRG

    RPE ZO-1 expression observed on MgF2 and tissue culture plastic

    ByGreg Madejski March 28, 2017

    Here are some more images from my ongoing cell culture project. My previous work and protocols: ZO-1 staining of confluent RPE cells on various MgF2 substrates I added twice the amount of primary antibody on these devices that I usually do (1:100 dilution, instead of 1:200).     High Porosity MgF2   TCP MgF2 Coverglass  

    Read More RPE ZO-1 expression observed on MgF2 and tissue culture plasticContinue

  • NRG

    manuscript mock figures: HUVEC migration and fibronectin

    ByHenry March 28, 2017

    [presentation] HUVEC migration and fibronectin

    Read More manuscript mock figures: HUVEC migration and fibronectinContinue

  • NRG

    Nanosphere litho quick update

    ByMarcela Mireles March 28, 2017

    I will keep this post short and start by saying that the process of establishing a reliable set-up for nanosphere deposition, by evaluating the repeatability of the deposition parameters, has been longer than anticipated. The nanospheres self-assemble at the hexane-water interface and stabilize laterally through electrostatic forces. The main deposition steps are: Add water to…

    Read More Nanosphere litho quick updateContinue

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    • Home
    • Publications
    • Membranes
      • Common Chip Formats
      • Common Membranes
      • Microslit Membranes
    • Devices
      • µSiM
        • Geometry
        • µSiM CAD Files
        • Assembly
          • Protocols.io (µSiM Assembly)
          • Instructions
          • Common Issues and Troubleshooting Tips
        • Cell Culture Protocols
          • Top Well: hCMEC/D3
          • Top Well: HUVEC
          • Bottom Channel Culturing
          • Immunocytochemistry Protocol
          • Impact of Chip Orientation on Fluorescence Imaging
          • Permeability: In Situ Method
          • Permeability: Sampling Method
          • Cell Culture Common Issues and Troubleshooting Tips
      • SepCon®
        • Sepcon Assembly
        • Sepcon Video Protocol: Assembly
        • SepCon Gasket Silhouette File
        • SepCon Video Protocol: Wetting the membrane
        • SepCon Video Protocol: Disassembly
      • µSiM-DX
        • µSIM Video Protocol: Capture of Nanoparticles
    • Impact
      • TraCe-bMPS
      • HCIC
      • LOMP
      • SiMPore