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Nanomembrane Research Group
  • memBrains

    iPSC-derived Brain Pericyte-like Cells

    ByPelin Kasap March 28, 2022March 28, 2022

    Introduction Pericytes are mural cells that line the outer surface of microvessels and regulate diverse aspects of vascular development and function. We differentiate brain-pericyte-like cells (BPLCs) from hiPSC clones using the protocol published by Eric Shusta’s lab (Gastfriend et al., 2021) (Figure 1). This protocol describes methods to differentiate hiPSCs to BPLCs via neural crest…

    Read More iPSC-derived Brain Pericyte-like CellsContinue

  • memBrains | Protocols

    Culture divider insert assembly and test

    ByChloe Chen March 24, 2022March 29, 2022

    Introduction We are designing a cell culture chamber insert to allow side-by-side co-culture of cells and ultimately triculture in the µSiM devices. Materials and Methods ALine devices assembly according to the “ALine Modular Device Assembly” instructions. 2-slot NPN membranes applied (NPSN100-2L, nanoporous silicon nitride 100 nm thick, 2 windows). Straight tweezers and chip tweezers are…

    Read More Culture divider insert assembly and testContinue

  • NRG

    Flow/No Flow Conditions for Affinity Based Capture of EVs

    ByMarlyn Torres March 18, 2022

    In previous experiments where the affinity based capture of EVs in ALine devices was tested, issues were encountered. It was noticed that when capturing EVs on the ALine, the non-biotinylated slit membranes had captured a higher quantity of EVs compared to biotinylated membranes. This conclusion led us to question if the flow through the ALine…

    Read More Flow/No Flow Conditions for Affinity Based Capture of EVsContinue

  • NRG

    Hemocompatibility Assessment of Microfluidic Extra Corporeal Membrane Oxygenator

    ByNayeem Imtiaz March 14, 2022March 14, 2022

    Introduction Risks of extracorporeal membrane oxygenation (ECMO) therapy can be attributed to large membrane areas and blood circuit volumes. These are particularly problematic in neonates with low blood volume. To address this, we are developing a miniaturized prototype microfluidic ECMO using ultrathin highly porous silicone membranes. Hemocompatibility (hemolysis and thrombosis) assessment of geometrical variants of…

    Read More Hemocompatibility Assessment of Microfluidic Extra Corporeal Membrane OxygenatorContinue

  • memBrains | NRG

    Little Back Dots in Coated Controls … How We Wonder What You Are.

    ByMichelle Trempel March 10, 2022June 8, 2022

    Introduction We are investigating some issues seen with long term attachment (up to 6 days) of the EECM-BMEC-like cells seen by collaborators in Bern, where they noticed black aggregates on the coated control devices that get worse at day 6. Some attachment issues and aggregates have also been seen at the University of Rochester in…

    Read More Little Back Dots in Coated Controls … How We Wonder What You Are.Continue

  • NRG

    Fabricating Thin Polymer Coatings to Study S. Aureus Durotaxis – PUA Optimization

    ByIsabelle Linares March 10, 2022March 5, 2024

    Introduction The work in this post explores the hypothesis that durotaxis affects the invasion of S. aureus into the osteocyte lacuna-canicular network (OLCN). To address this hypothesis, we modified the µSiM to enable the independent tuning of pore stiffness, ranging from those of soft-tissues to that of silicon nitride (~10X stiffer than bone). More background…

    Read More Fabricating Thin Polymer Coatings to Study S. Aureus Durotaxis – PUA OptimizationContinue

  • NRG

    I’ve looked at cloudiness from both sides now…

    ByDean Johnson February 15, 2022February 15, 2022

    “I’ve looked at clouds from both sides now” is a Joni Mitchell song. Some Background We are developing a white blood cell (WBC) detector to surveil peritoneal dialysate fluid during fluid exchanges for early detection of peritonitis. This preemptive monitoring is currently not available in clinical practice. The current detection method is by visual inspection…

    Read More I’ve looked at cloudiness from both sides now…Continue

  • NRG

    Who’s Your Cabby? Analyzing the Roles of Haptotaxis and Durotaxis on Staphylococcus Aureus Invasion of the Osteocyte Lacuna-Canicular Network

    ByMichael Klaczko February 15, 2022March 5, 2024

    As discussed in a previous post of mine, I am currently working on a project to develop an in vitro mimetic of the osteocyte lacuna-canicular network (OLCN) to improve the ability to predict Staphylococcus Aureus invasion and colonization of the OLCN during osteomyelitis. The purpose of this post is to provide more background behind Aim…

    Read More Who’s Your Cabby? Analyzing the Roles of Haptotaxis and Durotaxis on Staphylococcus Aureus Invasion of the Osteocyte Lacuna-Canicular NetworkContinue

  • NRG

    Fabricating Thin Polymer Coatings to Study S. Aureus Durotaxis – Stiffness Measurements

    ByIsabelle Linares February 15, 2022February 15, 2022

    Introduction The invasion of Staphlyococcus aureus into the cracks of cortical bone leads to osteomyelitis, a devastating disease often resolved by amputation [1]. The μSiM platform has been used to study the genetic mechanisms of S. aureus invasion. The membrane pores mimic the network of cracks in bone, referred to as the osteocyte lacuno-canalicular network…

    Read More Fabricating Thin Polymer Coatings to Study S. Aureus Durotaxis – Stiffness MeasurementsContinue

  • NRG

    Modeling Oxygen and Urea transfer in Nanomembrane Devices

    ByWilliam Stoddard February 14, 2022February 15, 2022

    Introduction Extracorporeal membrane oxygenation (ECMO) devices are used to supply oxygen to patients when they are unable to get sufficient oxygen through their lungs. Miniaturizing an ECMO device could be beneficial for neonatal patients, as it would require less blood to prime the device and operate efficiently at a lower overall flow volume. Dialysis is…

    Read More Modeling Oxygen and Urea transfer in Nanomembrane DevicesContinue

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    • Home
    • Publications
    • Membranes
      • Common Chip Formats
      • Common Membranes
      • Microslit Membranes
    • Devices
      • µSiM
        • Geometry
        • µSiM CAD Files
        • Assembly
          • Protocols.io (µSiM Assembly)
          • Instructions
          • Common Issues and Troubleshooting Tips
        • Cell Culture Protocols
          • Top Well: hCMEC/D3
          • Top Well: HUVEC
          • Bottom Channel Culturing
          • Immunocytochemistry Protocol
          • Impact of Chip Orientation on Fluorescence Imaging
          • Permeability: In Situ Method
          • Permeability: Sampling Method
          • Cell Culture Common Issues and Troubleshooting Tips
      • SepCon®
        • Sepcon Assembly
        • Sepcon Video Protocol: Assembly
        • SepCon Gasket Silhouette File
        • SepCon Video Protocol: Wetting the membrane
        • SepCon Video Protocol: Disassembly
      • µSiM-DX
        • µSIM Video Protocol: Capture of Nanoparticles
    • Impact
      • TraCe-bMPS
      • HCIC
      • LOMP
      • SiMPore